UNIQID Symbol Putative function Category *SS2000-1 *SS2000-2 *SS1-1 *SS1-2 HP1177 omp27 outer membrane protein Cell envelope -0.5 -0.5 0.5 0.5 HP0520 cag1 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0521 orf7 cag island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0522 cag3 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0523 cag4 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0524 cag5 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0525 virB11_1 "virB11 homolog, cag island protein" Cellular Processes -0.5 -0.5 0.5 0.5 HP0526 cag6 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0527 cag7 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0528 cag8 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0529 cag9 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0530 cag10 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0531 cag11 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0532 cag12 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0534 cag13 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0535 cag14 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0536 cag15 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0537 cag16 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0538 cag17 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0539 cag18 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0540 cag19 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0541 cag20 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0542 cag21 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0543 cag22 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0544 cag23 "cag pathogenicity island protein , DNA transfer protein, VirB4 homolog" Cellular Processes -0.5 -0.5 0.5 0.5 HP0545 cag24 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0546 cag25 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0547 cag26 cag pathogenicity island protein Cellular Processes -0.5 -0.5 0.5 0.5 HP0548 putative "DNA metabolism, DNA replication, recombination, and repair" DNA metabolism -0.5 -0.5 0.5 0.5 HP0091 hsdR type II restriction enzyme R protein DNA metabolism -0.5 -0.5 0.5 0.5 HP0483 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) DNA metabolism -0.5 -0.5 0.5 0.5 HP0217 unknown -0.5 -0.5 0.5 0.5 HP0484 unknown -0.5 -0.5 0.5 0.5 HP1353 unknown -0.5 -0.5 0.5 0.5 HP1519 unknown -0.5 -0.5 0.5 0.5 HP1520 unknown -0.5 -0.5 0.5 0.5 JHP0540 unknown putative sugar transferase -0.5 -0.5 0.5 0.5 JHP1049 unknown -0.5 -0.5 0.5 0.5 JHP1429 putative zn-dePENDENT ALCOHOL DEHYDROGENASE -0.5 -0.5 0.5 0.5 HP0041 comB3 DNA transformation competancy 0 0.3 0.5 0.5 HP1436 putative putative lipoprotein gene Cell envelope 0.1 -0.35 0.5 0.5 HP0432 putative protein kinase C-like protein Adaptations and atypical conditions 0.5 0.5 -0.5 -0.5 HP1578 putative LPS biosynthesis protein Cell envelope 0.5 0.5 -0.5 -0.5 HP0428 terY phage/colicin/tellurite resistance cluster Cellular Processes 0.5 0.5 -0.5 -0.5 HP0592 res type III restriction enzyme R protein DNA metabolism 0.5 0.5 -0.5 -0.5 HP0995 xerD integrase/recombinase DNA metabolism 0.5 0.5 -0.5 -0.5 HP1009 putative site-specific recombinase DNA metabolism 0.5 0.5 -0.5 -0.5 HP1209 iceA ulcer-associated gene restriction endonuclease DNA metabolism 0.5 0.5 -0.5 -0.5 HP1366 MBOIIR type IIS restriction enzyme R protein DNA metabolism 0.5 0.5 -0.5 -0.5 HP1367 mod type IIS restriction enzyme M1 protein DNA metabolism 0.5 0.5 -0.5 -0.5 HP1368 mod type IIS restriction enzyme M2 protein DNA metabolism 0.5 0.5 -0.5 -0.5 JHP0414 hsdS_1a RESTRICTION ENZYME (SPECIFICITY SUBUNIT) DNA metabolism 0.5 0.5 -0.5 -0.5 JHP0931 topA_3 topoisomerase I DNA metabolism 0.5 0.5 -0.5 -0.5 HP0600 spaB "multidrug resistance protein , putative secretion/efflux acb transporter" Transport and binding 0.5 0.5 -0.5 -0.5 HP0413 putative "transposase-like protein, PS3IS" Transposase-related functions 0.5 0.5 -0.5 -0.5 HP0414 IS200 IS200 insertion sequence from SARA17 Transposase-related functions 0.5 0.5 -0.5 -0.5 HP1007 putative Transposon-related functions Transposase-related functions 0.5 0.5 -0.5 -0.5 HP1008 IS200 IS200 insertion sequence from SARA17 Transposase-related functions 0.5 0.5 -0.5 -0.5 JHP0826 tnpB IS606 TRANSPOSASE Transposase-related functions 0.5 0.5 -0.5 -0.5 JHP0827 tnpA IS606 TRANSPOSASE Transposase-related functions 0.5 0.5 -0.5 -0.5 HP0052 unknown 0.5 0.5 -0.5 -0.5 HP0058 unknown 0.5 0.5 -0.5 -0.5 HP0339 unknown 0.5 0.5 -0.5 -0.5 HP0342 unknown 0.5 0.5 -0.5 -0.5 HP0431 ptc1 protein phosphatase 2C homolog 0.5 0.5 -0.5 -0.5 HP0433 unknown 0.5 0.5 -0.5 -0.5 HP0434 unknown 0.5 0.5 -0.5 -0.5 HP0435 unknown prematurely terminated mRNA decay factor-like protein 0.5 0.5 -0.5 -0.5 HP0449 unknown 0.5 0.5 -0.5 -0.5 HP0451 unknown 0.5 0.5 -0.5 -0.5 HP0452 conserved 5-methylcytosine-specific restriction enzyme mcrB related protein DNA metabolism 0.5 0.5 -0.5 -0.5 HP0453 unknown 0.5 0.5 -0.5 -0.5 HP0454 unknown 0.5 0.5 -0.5 -0.5 HP0766 unknown 0.5 0.5 -0.5 -0.5 HP0856 unknown 0.5 0.5 -0.5 -0.5 HP0986 unknown 0.5 0.5 -0.5 -0.5 HP0994 unknown 0.5 0.5 -0.5 -0.5 HP1142 unknown 0.5 0.5 -0.5 -0.5 HP1283 unknown 0.5 0.5 -0.5 -0.5 HP1438 conserved conserved hypothetical lipoprotein 0.5 0.5 -0.5 -0.5 HP1499 unknown 0.5 0.5 -0.5 -0.5 JHP0932 unknown 0.5 0.5 -0.5 -0.5 JHP0933 unknown 0.5 0.5 -0.5 -0.5 JHP0934 unknown 0.5 0.5 -0.5 -0.5 JHP0935 unknown 0.5 0.5 -0.5 -0.5 JHP0936 unknown 0.5 0.5 -0.5 -0.5 JHP0945 unknown 0.5 0.5 -0.5 -0.5 JHP0946 unknown 0.5 0.5 -0.5 -0.5 JHP0960 unknown 0.5 0.5 -0.5 -0.5 HP1257 unknown orotate phosphoribosyltransferase Pyrimidine ribonucleotide biosynthesis 0.5 0.5 0.3 0.15 HP1365 putative response regulator Regulatory functions 0.5 0.5 0 -0.3 HP0504 unknown 0.5 0.5 0.1 -0.4 HP0731 unknown 0.5 0.5 0.45 0.05 HP0823 conserved conserved hypothetical protein 0.5 0.5 0 0.45 HP0926 conserved conserved hypothetical protein 0.5 0.5 0.25 0.25 HP1551 conserved conserved hypothetical secreted protein 0.5 0.5 0.25 0.15 * The numbers quoted in these four columns refer to the values assigned by the graded GACK analysis to each of the genes in each of the four microarrays shown (described in Materials and Methods section)